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Table 3 Laboratory testing for coronavirus disease (COVID-19) in suspected human cases: interim guidance

From: The outcome of COVID-19 among the geriatric age group in African countries: protocol for a systematic review and meta-analysis

Test

Type of sample

Timing

Nucleic acid amplification tests (NAAT)

Lower respiratory tract

Collect on presentation.

Possibly repeated sampling to monitor clearance. Further research needed to determine effectiveness and reliability of repeated sampling.

Sputum

Aspirate

Lavage

Upper respiratory tract

Nasopharyngeal and Oropharyngeal swabs

Nasopharyngeal wash/nasopharyngeal aspirate.

Serology

Serum for serological testing once validated and available.

Paired samples are necessary for confirmation with the initial sample collected in the first week of illness and the second ideally collected 2–4 weeks later (optimal timing for convalescent sample needs to be established).